Basic Information
Locus ID:
gene:TRIDC6AG016640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 97263977 | 97267669 | - | gene:TRIDC6AG016640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 97,898.98 Da | 34.35 | 101.10 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 472 | 522 | 6.9E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 105 | 121 | 0.63 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 678 | 878 | 1.7E-26 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 555 | 612 | 1.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 76 | 1.1E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 292 | 2.13E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 881 | 6.34E-53 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 217 | 658 | 6.8E-70 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 687 | 894 | 8.7E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 268 | 340 | 2.1E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 267 | 1.2E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 174 | 1.2E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 341 | 672 | 3.5E-92 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 599 | 623 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 470 | 494 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 346 | 370 | 66.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 583 | 884 | 1.6E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 553 | 884 | 24.668789 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 734 | 746 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 599 | 612 | 2.4E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 106 | 119 | 2.4E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_048537183.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum urartu] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7QQS1 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG016640.