Basic Information
Locus ID:
gene:TRIDC6AG016600
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 97194678 | 97198331 | - | gene:TRIDC6AG016600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 109,019.59 Da | 36.62 | 97.68 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 714 | 978 | 3.92053E-87 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 386 | 408 | 0.26 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 709 | 975 | 9.1E-40 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 541 | 563 | 0.092 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 261 | 321 | 7.6E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 1 | 273 | 3.74E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 697 | 978 | 3.37E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 183 | 598 | 2.55E-65 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 86 | 2.1E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 87 | 137 | 1.1E-7 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 986 | 7.8E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 783 | 1.6E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 279 | 1.9E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 205 | 8.9E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 280 | 613 | 9.8E-89 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 408 | 432 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 284 | 308 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 332 | 355 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 235 | 259 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 162 | 186 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 38 | 62 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 539 | 562 | 0.19 | IPR003591 |
| SMART | SM00220 | serkin_6 | 708 | 981 | 1.0E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 708 | 981 | 35.820515 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 831 | 843 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 714 | 737 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 539 | 552 | 3.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 435 | 448 | 3.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_020170965.1 | tyrosine-sulfated glycopeptide receptor 1 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | M7ZXQ9 | Tyrosine-sulfated glycopeptide receptor 1 OS=Triticum urartu OX=4572 GN=TRIUR3_00373 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG016600.