Basic Information
Locus ID:
gene:TRIDC6AG016570
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 97017757 | 97022400 | - | gene:TRIDC6AG016570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 116,729.02 Da | 36.47 | 104.05 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 795 | 1060 | 1.03681E-97 | - |
| Pfam | PF13855 | Leucine rich repeat | 577 | 634 | 5.9E-11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 348 | 408 | 8.5E-11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 790 | 1056 | 1.6E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 473 | 532 | 8.5E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 62 | 99 | 9.1E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 232 | 536 | 1.53E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 770 | 1059 | 1.35E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 442 | 684 | 1.11E-44 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 290 | 9.35E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 749 | 864 | 1.6E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 865 | 1068 | 1.6E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 366 | 2.7E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 367 | 697 | 1.5E-89 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 62 | 223 | 5.9E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 293 | 1.8E-14 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 419 | 441 | 330.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 789 | 1059 | 4.3E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 322 | 346 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 371 | 395 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 321 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 597 | 620 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 621 | 645 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 495 | 519 | 18.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 789 | 1059 | 37.092575 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 912 | 924 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 795 | 818 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 621 | 634 | 7.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 600 | 613 | 7.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037445859.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NKR8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG016570.