Basic Information
Locus ID:
gene:TRIDC6AG011450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK18
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 57783077 | 57790188 | + | gene:TRIDC6AG011450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 50,246.09 Da | 41.54 | 90.05 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 369 | 425 | 4.67207E-13 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 1 | 242 | 3.48923E-118 | - |
| Pfam | PF00069 | Protein kinase domain | 3 | 243 | 5.8E-63 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 290 | 352 | 1.7E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 371 | 424 | 2.7E-11 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 261 | 1.89E-71 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 273 | 433 | 1.17E-32 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 69 | 263 | 7.8E-56 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 264 | 353 | 4.7E-41 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 269 | 423 | 4.7E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 68 | 5.0E-18 | - |
| SMART | SM00054 | efh_1 | 327 | 355 | 0.81 | IPR002048 |
| SMART | SM00054 | efh_1 | 290 | 318 | 0.0049 | IPR002048 |
| SMART | SM00054 | efh_1 | 399 | 427 | 0.038 | IPR002048 |
| SMART | SM00220 | serkin_6 | 1 | 243 | 4.9E-74 | IPR000719 |
| SMART | SM00054 | efh_1 | 369 | 397 | 0.0048 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 323 | 358 | 9.296966 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 243 | 44.286781 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 403 | 430 | 9.799083 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 365 | 400 | 11.500702 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 286 | 321 | 12.504936 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 336 | 348 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 408 | 420 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 378 | 390 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 299 | 311 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 105 | 117 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66210.1 | calcium-dependent protein kinase 28. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037445506.1 | calcium-dependent protein kinase 4 [Triticum dicoccoides] | 0 |
| Q6Z2M9 | Calcium-dependent protein kinase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D6B1B2 | Calcium-dependent protein kinase 28 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG011450.