Basic Information
Locus ID:
gene:TRIDC6AG005390
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 20444317 | 20447923 | + | gene:TRIDC6AG005390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 112,336.75 Da | 34.71 | 99.80 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 782 | 1055 | 1.22137E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 777 | 1050 | 1.4E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 467 | 487 | 0.86 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 343 | 401 | 1.2E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 239 | 7.74E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 760 | 1052 | 5.6E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 550 | 664 | 4.76E-21 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 179 | 516 | 1.1E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 192 | 2.7E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 747 | 852 | 3.1E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 295 | 676 | 1.5E-97 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 294 | 6.1E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 853 | 1062 | 2.6E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 220 | 244 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 268 | 291 | 5.5 | IPR003591 |
| SMART | SM00220 | serkin_6 | 776 | 1056 | 5.5E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 0.69 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 465 | 489 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 625 | 32.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 776 | 1055 | 37.869946 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 782 | 804 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 901 | 913 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02220.1 | phytosulfokin receptor 1. Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). | 0 |
| RefSeq | XP_037449941.1 | phytosulfokine receptor 1-like [Triticum dicoccoides] | 0 |
| Q9ZVR7 | Phytosulfokine receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSKR1 PE=1 SV=4 | 0 | |
| TrEMBL | A0A8R7QMN1 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG005390.