Basic Information
Locus ID:
gene:TRIDC6AG005250
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 20186775 | 20189187 | + | gene:TRIDC6AG005250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 82,249.31 Da | 35.01 | 87.50 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 449 | 714 | 4.72829E-90 | - |
| CDD | cd00054 | EGF_CA | 321 | 350 | 8.66099E-9 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 35 | 97 | 1.8E-14 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 446 | 710 | 3.3E-42 | IPR001245 |
| Pfam | PF07645 | Calcium-binding EGF domain | 321 | 354 | 8.2E-7 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 318 | 352 | 1.57E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 427 | 712 | 1.62E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 518 | 1.8E-29 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 325 | 364 | 1.2E-9 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 273 | 324 | 2.1E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 732 | 1.3E-53 | - |
| SMART | SM00181 | egf_5 | 282 | 320 | 14.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 321 | 362 | 9.1E-7 | IPR001881 |
| SMART | SM00220 | serkin_6 | 443 | 714 | 4.7E-31 | IPR000719 |
| SMART | SM00181 | egf_5 | 324 | 362 | 0.012 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 321 | 356 | 10.089634 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 443 | 714 | 35.69331 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 449 | 471 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 336 | 347 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 321 | 345 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 564 | 576 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037449595.1 | wall-associated receptor kinase 3-like [Triticum dicoccoides] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6QCE3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG005250.