Basic Information
Locus ID:
gene:TRIDC6AG004660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 17598287 | 17599800 | + | gene:TRIDC6AG004660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 41,925.86 Da | 48.35 | 67.71 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 162 | 195 | 0.079 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 64 | 389 | 4.73E-40 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 54 | 388 | 2.1E-68 | IPR015943 |
| SMART | SM00320 | WD40_4 | 291 | 332 | 7.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 62 | 101 | 0.16 | IPR001680 |
| SMART | SM00320 | WD40_4 | 199 | 238 | 0.53 | IPR001680 |
| SMART | SM00320 | WD40_4 | 152 | 195 | 0.37 | IPR001680 |
| SMART | SM00320 | WD40_4 | 243 | 281 | 0.017 | IPR001680 |
| SMART | SM00320 | WD40_4 | 111 | 149 | 460.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 250 | 281 | 10.742378 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 250 | 281 | 9.019239 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23730.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037449896.1 | WD repeat-containing protein RUP2-like [Triticum dicoccoides] | 0 |
| Q9FFA7 | WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NI28 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG004660.