Basic Information
Locus ID:
gene:TRIDC6AG003180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Epidermal growth factor-like domain.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 11909025 | 11920244 | + | gene:TRIDC6AG003180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 81,763.04 Da | 32.83 | 83.42 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 292 | 323 | 7.45784E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 410 | 675 | 2.3E-45 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 292 | 333 | 1.2E-9 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 30 | 83 | 2.0E-10 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 289 | 334 | 5.2E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 678 | 3.37E-71 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 243 | 334 | 3.4E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 704 | 6.0E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 377 | 484 | 1.8E-27 | - |
| SMART | SM00220 | serkin_6 | 409 | 691 | 4.3E-28 | IPR000719 |
| SMART | SM00179 | egfca_6 | 292 | 334 | 1.7E-6 | IPR001881 |
| SMART | SM00181 | egf_5 | 295 | 334 | 0.01 | IPR000742 |
| SMART | SM00181 | egf_5 | 244 | 291 | 5.2 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 409 | 691 | 37.205647 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 292 | 334 | 11.246588 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 530 | 542 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 309 | 320 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 292 | 318 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 415 | 437 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 720 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 735 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037449775.1 | wall-associated receptor kinase 5-like [Triticum dicoccoides] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NJC2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG003180.