Basic Information
Locus ID:
gene:TRIDC6AG002220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 8319607 | 8323739 | - | gene:TRIDC6AG002220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 73,771.08 Da | 45.86 | 88.19 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 601 | 641 | 1.06251E-16 | - |
| CDD | cd01989 | STK_N | 2 | 149 | 1.4249E-29 | - |
| Pfam | PF04564 | U-box domain | 598 | 664 | 8.7E-17 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 320 | 574 | 1.7E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 299 | 575 | 1.48E-63 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 596 | 667 | 1.06E-20 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 3 | 115 | 1.59E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 597 | 668 | 1.5E-21 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 388 | 589 | 1.0E-47 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 1 | 115 | 2.5E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 289 | 387 | 7.0E-21 | - |
| SMART | SM00220 | serkin_6 | 315 | 586 | 4.4E-26 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 600 | 662 | 7.3E-20 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 315 | 580 | 34.378849 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 596 | 669 | 26.397335 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 321 | 342 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 433 | 445 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 198 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61550.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037445075.1 | U-box domain-containing protein 52-like [Triticum dicoccoides] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NJV5 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG002220.