Basic Information
Locus ID:
gene:TRIDC6AG001500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Large proline-rich protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 5747289 | 5760212 | + | gene:TRIDC6AG001500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 103,664.75 Da | 50.02 | 73.19 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 63 | 130 | 4.44873E-24 | - |
| Pfam | PF00240 | Ubiquitin family | 63 | 133 | 7.6E-23 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 57 | 132 | 1.8E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 45 | 137 | 3.2E-26 | - |
| SMART | SM00213 | ubq_7 | 61 | 132 | 1.2E-23 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 61 | 136 | 23.505753 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 87 | 112 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 71 | 91 | 6.5E-9 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 113 | 134 | 6.5E-9 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 92 | 112 | 6.5E-9 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 777 | 806 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 777 | 797 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 669 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 900 | 931 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 765 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 765 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42220.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_037449623.1 | ubiquitin-like domain-containing protein CIP73 isoform X2 [Triticum dicoccoides] | 0 |
| D5LXJ0 | Ubiquitin-like domain-containing protein CIP73 OS=Lotus japonicus OX=34305 GN=CIP73 PE=1 SV=1 | 0 | |
| TrEMBL | M7ZN79 | Deubiquitination-protection protein dph1 OS=Triticum urartu OX=4572 GN=TRIUR3_01270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG001500.