Basic Information
Locus ID:
gene:TRIDC6AG000450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 1208400 | 1217907 | - | gene:TRIDC6AG000450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 191,743.31 Da | 47.46 | 87.62 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1379 | 1789 | 2.22147E-122 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1427 | 1794 | 6.9E-83 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1372 | 1787 | 1.96E-95 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 107 | 576 | 3.6E-38 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 96 | 398 | 7.0E-49 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1319 | 1555 | 4.5E-42 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1666 | 1792 | 1.1E-30 | - |
| SMART | SM00185 | arm_5 | 186 | 227 | 60.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 269 | 307 | 17.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 139 | 184 | 7.8 | IPR000225 |
| SMART | SM00119 | hect_3 | 1393 | 1794 | 4.5E-84 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1419 | 1794 | 57.978428 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1192 | 1210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1049 | 1071 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 888 | 1071 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1192 | 1211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1005 | 1023 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 970 | 1004 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 463 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_044407141.1 | E3 ubiquitin-protein ligase UPL3-like [Triticum aestivum] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NID4 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG000450.