Basic Information
Locus ID:
gene:TRIDC5BG083780
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 710530692 | 710536795 | + | gene:TRIDC5BG083780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 133,754.50 Da | 52.71 | 67.25 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 952 | 1209 | 7.74649E-117 | - |
| CDD | cd06410 | PB1_UP2 | 172 | 268 | 7.35075E-46 | - |
| Pfam | PF00564 | PB1 domain | 185 | 269 | 8.3E-18 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 948 | 1209 | 1.4E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 938 | 1207 | 8.63E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 184 | 270 | 4.71E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1034 | 1227 | 2.3E-55 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 187 | 270 | 9.1E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 939 | 1033 | 4.5E-26 | - |
| SMART | SM00220 | serkin_6 | 946 | 1215 | 5.8E-58 | IPR000719 |
| SMART | SM00666 | PB1_new | 183 | 270 | 3.6E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 946 | 1212 | 41.191437 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1071 | 1083 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 952 | 977 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1065 | 1083 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1136 | 1158 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1180 | 1202 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1028 | 1041 | 1.1E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 736 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 576 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 500 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_037444749.1 | uncharacterized protein LOC119313039 isoform X1 [Triticum dicoccoides] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LZ26 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG083780.