Basic Information
Locus ID:
gene:TRIDC5BG083610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBC4
Description:
Ubiquitin-conjugating enzyme E2, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 710116760 | 710119986 | + | gene:TRIDC5BG083610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.67 | 27,966.84 Da | 63.66 | 62.86 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 65 | 201 | 6.58162E-49 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 68 | 200 | 7.2E-38 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 62 | 206 | 2.96E-45 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 53 | 218 | 3.9E-48 | IPR016135 |
| SMART | SM00212 | ubc_7 | 62 | 206 | 3.6E-49 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 61 | 206 | 39.384293 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 131 | 147 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 232 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63800.1 | ubiquitin-conjugating enzyme 5. | 0 |
| RefSeq | XP_037444743.1 | ubiquitin-conjugating enzyme E2-23 kDa [Triticum dicoccoides] | 0 |
| P16577 | Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LZ02 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG083610.