Basic Information
Locus ID:
gene:TRIDC5BG082070
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 704693431 | 704953807 | + | gene:TRIDC5BG082070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 76,889.07 Da | 33.02 | 101.20 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 240 | 272 | 2.7E-6 | IPR001810 |
| Pfam | PF08387 | FBD | 596 | 638 | 2.1E-5 | IPR006566 |
| SUPERFAMILY | SSF81383 | F-box domain | 235 | 278 | 9.94E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 379 | 638 | 1.2E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 370 | 657 | 8.5E-13 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 238 | 278 | 1.3E-7 | - |
| SMART | SM00256 | fbox_2 | 241 | 281 | 1.6E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 235 | 271 | 8.702637 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 159 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_044391809.1 | F-box/FBD/LRR-repeat protein At1g13570-like isoform X1 [Triticum aestivum] | 0 |
| Q9FZ70 | F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LYS7 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG082070.