Basic Information
Locus ID:
gene:TRIDC5BG081000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 699971777 | 699982217 | - | gene:TRIDC5BG081000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 58,952.03 Da | 48.57 | 86.59 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03859 | CG-1 domain | 21 | 132 | 2.6E-42 | IPR005559 |
| Pfam | PF00069 | Protein kinase domain | 205 | 481 | 5.9E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 182 | 485 | 3.51E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 295 | 498 | 9.1E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 165 | 274 | 2.1E-29 | - |
| SMART | SM00220 | serkin_6 | 203 | 493 | 2.2E-29 | IPR000719 |
| SMART | SM01076 | CG_1_2 | 16 | 134 | 3.0E-51 | IPR005559 |
| ProSiteProfiles | PS51437 | CG-1 DNA-binding domain profile. | 13 | 139 | 61.053001 | IPR005559 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 203 | 493 | 36.541351 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 338 | 350 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 209 | 232 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38830.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_037444561.1 | putative receptor-like protein kinase At4g00960 isoform X2 [Triticum dicoccoides] | 0 |
| Q9T0J1 | Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6N333 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG081000.