Basic Information
Locus ID:
gene:TRIDC5BG080990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 699919859 | 699923613 | + | gene:TRIDC5BG080990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 122,887.38 Da | 42.02 | 104.63 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 157 | 215 | 7.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 668 | 727 | 1.5E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 65 | 106 | 7.0E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 835 | 1123 | 3.1E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 228 | 490 | 1.25E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 297 | 2.83E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 806 | 1125 | 1.32E-66 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 495 | 754 | 4.42E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 66 | 177 | 1.0E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 561 | 618 | 8.7E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 227 | 4.4E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 813 | 914 | 6.8E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 915 | 1139 | 3.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 619 | 759 | 1.4E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 462 | 560 | 2.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 228 | 461 | 5.4E-61 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 714 | 739 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 349 | 373 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 617 | 642 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 545 | 569 | 26.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 832 | 1135 | 4.1E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 253 | 276 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 445 | 467 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 178 | 31.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 157 | 179 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 832 | 1137 | 35.325825 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 838 | 862 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 959 | 971 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037444559.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LY84 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG080990.