Basic Information
Locus ID:
gene:TRIDC5BG080950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 699853022 | 699856770 | - | gene:TRIDC5BG080950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 122,449.87 Da | 39.36 | 103.85 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 515 | 537 | 0.24 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 803 | 1088 | 1.9E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 124 | 183 | 4.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 272 | 330 | 1.9E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 636 | 695 | 1.3E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 74 | 9.3E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 774 | 1090 | 4.65E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 466 | 722 | 4.42E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 197 | 459 | 1.04E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 265 | 3.06E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 781 | 883 | 1.9E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 589 | 727 | 3.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 146 | 6.3E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 193 | 4.2E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 884 | 1118 | 3.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 429 | 5.0E-61 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 435 | 583 | 2.6E-40 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 413 | 435 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 513 | 537 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 123 | 146 | 31.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 800 | 1100 | 2.4E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 658 | 681 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 682 | 707 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 221 | 244 | 110.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 125 | 147 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 800 | 1095 | 36.668556 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 928 | 940 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 806 | 831 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47580.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037444555.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum dicoccoides] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453MJ28 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG080950.