Basic Information
Locus ID:
gene:TRIDC5BG079750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 693619436 | 693621315 | - | gene:TRIDC5BG079750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 44,234.09 Da | 49.22 | 105.07 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 42 | 88 | 1.5E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 295 | 378 | 2.5E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 381 | 2.11E-19 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 209 | 2.1E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 216 | 2.9E-58 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 284 | 367 | 7.4E-18 | - |
| SMART | SM00369 | LRR_typ_2 | 171 | 195 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 27 | 50 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2 | 26 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 51 | 74 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 75 | 99 | 5.5 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 291 | 416 | 11.863386 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 53 | 75 | 7.080498 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 297 | 321 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 148 | 161 | 6.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 54 | 67 | 6.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56040.1 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_044414504.1 | leucine-rich repeat receptor-like serine/threonine-protein kinase RGI4 [Triticum aestivum] | 0 |
| F4K6B8 | Leucine-rich repeat receptor-like serine/threonine-protein kinase RGI4 OS=Arabidopsis thaliana OX=3702 GN=RGI4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YU16 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG079750.