halophFGD

Basic Information

Locus ID: gene:TRIDC5BG079530

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Short Name: WDR3

Description: WD domain, G-beta repeat

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
5B	692790747	692795773	+	gene:TRIDC5BG079530

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.07	10,882.79 Da	30.75	117.71	0.33

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF117289	Nucleoporin domain	5	41	1.88E-7	-
Gene3D	G3DSA:2.130.10.10	-	3	92	1.1E-6	IPR015943
ProSiteProfiles	PS50082	Trp-Asp (WD) repeats profile.	17	39	8.703868	IPR001680

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K14556 (U3 small nucleolar RNA-associated protein 12)

Pathway:

ko03008 (Ribosome biogenesis in eukaryotes) map03008 (Ribosome biogenesis in eukaryotes)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_039024828.1	WD repeat-containing protein 3-like [Hibiscus syriacus]	0
TrEMBL	A0A2Z2DQ62	WD40 repeat-containing 3-like protein OS=Aegilops tauschii OX=37682 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5BG079530.