Basic Information
Locus ID:
gene:TRIDC5BG079110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 691872077 | 691874630 | - | gene:TRIDC5BG079110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 90,921.59 Da | 38.66 | 85.93 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 49 | 155 | 5.29137E-30 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 532 | 806 | 7.63584E-90 | - |
| CDD | cd01098 | PAN_AP_plant | 333 | 416 | 2.64624E-18 | - |
| Pfam | PF00024 | PAN domain | 344 | 395 | 8.8E-5 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 258 | 319 | 4.8E-11 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 529 | 801 | 5.4E-59 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 81 | 169 | 5.0E-23 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 509 | 804 | 9.58E-73 | IPR011009 |
| SUPERFAMILY | SSF57414 | Hairpin loop containing domain-like | 344 | 393 | 2.12E-5 | - |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 68 | 210 | 1.1E-27 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 601 | 811 | 2.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 495 | 600 | 5.4E-26 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 31 | 153 | 2.9E-17 | IPR036426 |
| SMART | SM00473 | ntp_6 | 340 | 415 | 0.0011 | IPR003609 |
| SMART | SM00108 | blect_4 | 40 | 155 | 9.0E-32 | IPR001480 |
| SMART | SM00220 | serkin_6 | 526 | 804 | 2.8E-40 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 811 | 5.0E-219 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 24 | 153 | 14.998173 | IPR001480 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 287 | 323 | 9.743026 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 526 | 804 | 39.325748 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 337 | 417 | 8.448572 | IPR003609 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 532 | 554 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 644 | 656 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24080.2 | - | 0 |
| RefSeq | XP_037444466.1 | putative receptor protein kinase ZmPK1 isoform X1 [Triticum dicoccoides] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LXS1 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG079110.