Basic Information
Locus ID:
gene:TRIDC5BG078330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Epidermal growth factor-like domain.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 687599381 | 687604156 | - | gene:TRIDC5BG078330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 103,214.94 Da | 43.80 | 83.60 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 470 | 508 | 3.37166E-7 | - |
| CDD | cd14066 | STKc_IRAK | 600 | 861 | 1.18135E-87 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 310 | 367 | 1.1E-10 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 38 | 84 | 2.1E-8 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 598 | 862 | 5.7E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 865 | 1.64E-75 | IPR011009 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 431 | 509 | 1.73E-6 | IPR009030 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 416 | 473 | 2.3E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 474 | 509 | 9.1E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 670 | 881 | 1.9E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 558 | 669 | 4.3E-32 | - |
| SMART | SM00220 | serkin_6 | 594 | 868 | 3.1E-32 | IPR000719 |
| SMART | SM00181 | egf_5 | 252 | 299 | 79.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 470 | 508 | 2.9E-5 | IPR001881 |
| SMART | SM00181 | egf_5 | 419 | 469 | 1.7 | IPR000742 |
| SMART | SM00181 | egf_5 | 473 | 508 | 20.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 594 | 868 | 36.060795 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 470 | 493 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 716 | 728 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 600 | 623 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 890 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 901 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037444412.1 | wall-associated receptor kinase-like 6 [Triticum dicoccoides] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LXJ7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG078330.