Basic Information
Locus ID:
gene:TRIDC5BG077670
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 684813259 | 684852701 | - | gene:TRIDC5BG077670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 244,963.08 Da | 45.09 | 90.02 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00102 | IPT | 1594 | 1681 | 3.25377E-6 | - |
| Pfam | PF00612 | IQ calmodulin-binding motif | 2030 | 2049 | 0.013 | IPR000048 |
| Pfam | PF01833 | IPT/TIG domain | 1594 | 1679 | 8.0E-8 | IPR002909 |
| Pfam | PF00931 | NB-ARC domain | 512 | 752 | 6.0E-38 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 39 | 284 | 1.2E-43 | IPR000719 |
| Pfam | PF03859 | CG-1 domain | 1343 | 1456 | 1.2E-46 | IPR005559 |
| Pfam | PF00612 | IQ calmodulin-binding motif | 2006 | 2025 | 0.14 | IPR000048 |
| Pfam | PF18052 | Rx N-terminal domain | 346 | 429 | 2.1E-11 | IPR041118 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 298 | 5.41E-61 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 501 | 765 | 7.41E-51 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 2001 | 2054 | 4.51E-6 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 862 | 1214 | 3.37E-22 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 1789 | 1893 | 2.95E-17 | IPR036770 |
| SUPERFAMILY | SSF81296 | E set domains | 1595 | 1680 | 4.04E-18 | IPR014756 |
| Gene3D | G3DSA:1.25.40.20 | - | 1765 | 2006 | 6.1E-18 | IPR036770 |
| Gene3D | G3DSA:3.40.50.300 | - | 493 | 654 | 2.8E-29 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 109 | 7.5E-23 | - |
| Gene3D | G3DSA:1.20.5.190 | - | 2007 | 2052 | 6.0E-12 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 745 | 841 | 3.1E-11 | IPR036388 |
| Gene3D | G3DSA:1.20.5.4130 | - | 346 | 455 | 1.5E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 319 | 1.5E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 848 | 1220 | 1.2E-12 | IPR032675 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1588 | 1684 | 1.5E-22 | IPR013783 |
| SMART | SM00015 | iq_5 | 2004 | 2026 | 0.24 | IPR000048 |
| SMART | SM01076 | CG_1_2 | 1340 | 1458 | 1.1E-69 | IPR005559 |
| SMART | SM00015 | iq_5 | 2027 | 2049 | 0.55 | IPR000048 |
| SMART | SM00220 | serkin_6 | 37 | 302 | 3.8E-28 | IPR000719 |
| SMART | SM00248 | ANK_2a | 1870 | 1899 | 1500.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 1831 | 1860 | 0.013 | IPR002110 |
| ProSiteProfiles | PS50096 | IQ motif profile. | 2005 | 2034 | 8.2057 | IPR000048 |
| ProSiteProfiles | PS50096 | IQ motif profile. | 2028 | 2052 | 8.1508 | IPR000048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 307 | 32.824108 | IPR000719 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 1831 | 1863 | 8.73634 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 1798 | 1830 | 8.70963 | IPR002110 |
| ProSiteProfiles | PS51437 | CG-1 DNA-binding domain profile. | 1337 | 1463 | 76.859032 | IPR005559 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 65 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 528 | 543 | 5.1E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 698 | 712 | 5.1E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 601 | 615 | 5.1E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1025 | 1041 | 5.1E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1273 | 1294 | - | - |
| Coils | Coil | Coil | 2103 | 2123 | - | - |
| Coils | Coil | Coil | 246 | 266 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22300.1 | signal responsive 1. Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses. | 0 |
| RefSeq | XP_048572799.1 | disease resistance protein RGA5-like isoform X1 [Triticum urartu] | 0 |
| Q2R8L1 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6HYZ0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG077670.