Basic Information
Locus ID:
gene:TRIDC5BG076480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 679057857 | 679060293 | + | gene:TRIDC5BG076480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 10,858.29 Da | 50.60 | 88.23 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 7 | 74 | 3.20151E-15 | - |
| Pfam | PF00240 | Ubiquitin family | 9 | 76 | 2.3E-14 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 76 | 3.68E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 88 | 6.9E-16 | - |
| SMART | SM00213 | ubq_7 | 5 | 76 | 1.1E-10 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 5 | 77 | 15.753712 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039142222.1 | ubiquitin-NEDD8-like protein RUB2 [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A8K0P687 | Ubiquitin-like domain-containing protein OS=Ladona fulva OX=123851 GN=J437_LFUL012527 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG076480.