Basic Information
Locus ID:
gene:TRIDC5BG075040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein of unknown function (DUF3675)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 669022500 | 669023517 | - | gene:TRIDC5BG075040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 7,067.06 Da | 44.80 | 43.28 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12906 | RING-variant domain | 3 | 34 | 3.7E-10 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 3 | 39 | 1.18E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 40 | 9.1E-14 | IPR013083 |
| SMART | SM00744 | ringv_2 | 1 | 35 | 1.3E-5 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 1 | 41 | 15.840471 | IPR011016 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01275.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_037425174.1 | E3 ubiquitin-protein ligase MARCHF2-like [Triticum dicoccoides] | 0 |
| Q5ZJ41 | E3 ubiquitin-protein ligase MARCHF5 OS=Gallus gallus OX=9031 GN=MARCHF5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6A1U1 | RING-CH-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG075040.