Basic Information
Locus ID:
gene:TRIDC5BG074470
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 665110813 | 665112970 | - | gene:TRIDC5BG074470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 72,610.15 Da | 50.86 | 94.70 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 60 | 283 | 5.13331E-88 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 38 | 294 | 1.2E-67 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 380 | 576 | 4.5E-45 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 38 | 282 | 1.07E-67 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 360 | 640 | 1.35E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 452 | 641 | 4.1E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 451 | 8.6E-31 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 37 | 282 | 4.6E-62 | - |
| SMART | SM00220 | serkin_6 | 375 | 613 | 3.6E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 375 | 664 | 35.650906 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 152 | 158 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 496 | 508 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 381 | 405 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_044391325.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum aestivum] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LVE4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG074470.