Basic Information
Locus ID:
gene:TRIDC5BG074050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 662184199 | 662201200 | - | gene:TRIDC5BG074050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 139,709.30 Da | 43.39 | 93.15 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 39 | 271 | 7.2E-48 | IPR000719 |
| Pfam | PF00931 | NB-ARC domain | 459 | 695 | 5.8E-47 | IPR002182 |
| Pfam | PF13855 | Leucine rich repeat | 844 | 898 | 5.8E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 778 | 1183 | 2.25E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 309 | 2.83E-67 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 448 | 709 | 1.47E-40 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 22 | 339 | 1.0E-72 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 603 | 693 | 2.4E-13 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 428 | 599 | 3.6E-23 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1002 | 1198 | 1.7E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 812 | 980 | 1.5E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 694 | 788 | 5.9E-9 | IPR036388 |
| SMART | SM00369 | LRR_typ_2 | 911 | 934 | 6.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 864 | 886 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 887 | 910 | 32.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 38 | 317 | 7.3E-35 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 866 | 887 | 7.288416 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 317 | 37.007771 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 66 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 885 | 901 | 2.5E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 468 | 483 | 2.5E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 542 | 556 | 2.5E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 639 | 653 | 2.5E-18 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04120 (Ubiquitin mediated proteolysis)
map04120 (Ubiquitin mediated proteolysis)
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04350 (TGF-beta signaling pathway)
map04350 (TGF-beta signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61180.1 | LRR and NB-ARC domains-containing disease resistance protein. | 0 |
| RefSeq | XP_037444167.1 | probable disease resistance protein At1g61300 [Triticum dicoccoides] | 0 |
| Q940K0 | Disease resistance protein UNI OS=Arabidopsis thaliana OX=3702 GN=UNI PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6LV91 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG074050.