Basic Information
Locus ID:
gene:TRIDC5BG073370
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1 NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 659441644 | 659460192 | + | gene:TRIDC5BG073370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 61,305.43 Da | 32.67 | 95.39 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01493 | APPBP1_RUB | 15 | 553 | 0.0 | - |
| Pfam | PF00899 | ThiF family | 17 | 541 | 2.2E-24 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 14 | 553 | 1.06E-127 | IPR035985 |
| Gene3D | G3DSA:3.40.50.720 | - | 5 | 275 | 1.3E-63 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 394 | 555 | 4.6E-36 | - |
| PIRSF | PIRSF039099 | APP-BP1 | 367 | 555 | 3.9E-39 | IPR030667 |
| PIRSF | PIRSF039099 | APP-BP1 | 7 | 336 | 3.9E-115 | IPR030667 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05180.1 | NAD(P)-binding Rossmann-fold superfamily protein. Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves. | 0 |
| RefSeq | XP_037444146.1 | NEDD8-activating enzyme E1 regulatory subunit AXR1-like isoform X1 [Triticum dicoccoides] | 0 |
| P42744 | NEDD8-activating enzyme E1 regulatory subunit AXR1 OS=Arabidopsis thaliana OX=3702 GN=AXR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LWM1 | NEDD8-activating enzyme E1 regulatory subunit OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG073370.