Basic Information
Locus ID:
gene:TRIDC5BG072940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 657305916 | 657307222 | - | gene:TRIDC5BG072940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 29,467.95 Da | 48.87 | 82.44 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 3 | 70 | 2.92572E-14 | - |
| CDD | cd17039 | Ubl_ubiquitin_like | 92 | 147 | 5.48104E-5 | - |
| Pfam | PF00240 | Ubiquitin family | 3 | 70 | 8.4E-16 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 94 | 146 | 4.8E-5 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 95 | 169 | 5.07E-7 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 72 | 5.53E-17 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 174 | 257 | 8.06E-7 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 91 | 173 | 2.8E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 174 | 261 | 1.9E-8 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 73 | 3.0E-17 | - |
| SMART | SM00213 | ubq_7 | 1 | 72 | 7.4E-10 | IPR000626 |
| SMART | SM00213 | ubq_7 | 186 | 260 | 11.0 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 76 | 18.236107 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05230.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_044394139.1 | ubiquitin-NEDD8-like protein RUB2 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6LWI7 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG072940.