Basic Information
Locus ID:
gene:TRIDC5BG071540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 648196678 | 648197686 | - | gene:TRIDC5BG071540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.41 | 30,545.12 Da | 53.23 | 71.81 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 3 | 76 | 4.3E-13 | IPR000626 |
| Pfam | PF12776 | Myb/SANT-like DNA-binding domain | 144 | 237 | 1.0E-12 | IPR024752 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 78 | 1.13E-17 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 92 | 9.9E-20 | - |
| SMART | SM00213 | ubq_7 | 1 | 74 | 1.7E-10 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 78 | 16.559401 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 129 | - | - |
| Coils | Coil | Coil | 192 | 212 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037438634.1 | uncharacterized protein LOC119306551 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6LW82 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG071540.