Basic Information
Locus ID:
gene:TRIDC5BG071320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 647522092 | 647525887 | - | gene:TRIDC5BG071320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 62,559.53 Da | 46.92 | 81.56 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 59 | 317 | 2.52616E-134 | - |
| CDD | cd15898 | EFh_PI-PLC | 366 | 483 | 8.19893E-16 | - |
| Pfam | PF00036 | EF hand | 438 | 463 | 1.9E-6 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 365 | 424 | 9.2E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 61 | 318 | 4.5E-73 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 342 | 488 | 7.1E-33 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 327 | 2.83E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 62 | 145 | 3.3E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 359 | 427 | 2.0E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 146 | 328 | 2.7E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 336 | 486 | 2.0E-42 | - |
| SMART | SM00054 | efh_1 | 365 | 393 | 1.2E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 60 | 318 | 7.8E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 437 | 465 | 5.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 401 | 429 | 0.054 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 397 | 432 | 8.54379 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 433 | 468 | 13.425486 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 361 | 396 | 16.047653 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 318 | 48.640053 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 446 | 458 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 89 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 180 | 192 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 410 | 422 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_037444030.1 | calcium-dependent protein kinase 8-like [Triticum dicoccoides] | 0 |
| Q75GE8 | Calcium-dependent protein kinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LW00 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG071320.