Basic Information
Locus ID:
gene:TRIDC5BG070970
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 644488862 | 644491146 | + | gene:TRIDC5BG070970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 30,121.71 Da | 59.36 | 85.52 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 6 | 54 | 1.3E-10 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 6 | 64 | 1.75E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 74 | 1.8E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 6 | 54 | 6.3E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 6 | 55 | 12.813844 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 22 | 31 | - | IPR017907 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037438617.1 | uncharacterized protein LOC119306529 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6LVP8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG070970.