Basic Information
Locus ID:
gene:TRIDC5BG070640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 642729070 | 642731486 | + | gene:TRIDC5BG070640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 78,756.97 Da | 48.20 | 83.69 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 390 | 654 | 3.40269E-89 | - |
| CDD | cd01098 | PAN_AP_plant | 220 | 308 | 1.53069E-11 | - |
| Pfam | PF08276 | PAN-like domain | 228 | 285 | 3.6E-6 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 387 | 649 | 4.2E-50 | IPR000719 |
| Pfam | PF00954 | S-locus glycoprotein domain | 135 | 192 | 1.9E-5 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 363 | 653 | 1.78E-77 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 2 | 47 | 1.26E-9 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 355 | 457 | 1.5E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 458 | 671 | 4.5E-59 | - |
| SMART | SM00220 | serkin_6 | 384 | 652 | 2.6E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 384 | 667 | 38.98653 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 223 | 310 | 7.923216 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 503 | 515 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 390 | 411 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_037442068.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Triticum dicoccoides] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6MYX9 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG070640.