Basic Information
Locus ID:
gene:TRIDC5BG068770
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 630162357 | 630165687 | + | gene:TRIDC5BG068770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 54,546.37 Da | 40.51 | 100.79 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 113 | 149 | 2.21575E-6 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 224 | 486 | 9.9E-46 | IPR001245 |
| Pfam | PF07645 | Calcium-binding EGF domain | 113 | 148 | 3.7E-7 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 110 | 156 | 1.79E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 222 | 490 | 9.99E-67 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 68 | 156 | 6.3E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 297 | 494 | 1.9E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 198 | 296 | 1.0E-20 | - |
| SMART | SM00181 | egf_5 | 116 | 156 | 0.017 | IPR000742 |
| SMART | SM00220 | serkin_6 | 222 | 487 | 3.4E-30 | IPR000719 |
| SMART | SM00181 | egf_5 | 71 | 112 | 27.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 113 | 156 | 3.1E-8 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 113 | 156 | 9.771711 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 222 | 487 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 341 | 353 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 228 | 249 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 131 | 142 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 113 | 140 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037443893.1 | wall-associated receptor kinase 1-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6LV95 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG068770.