Basic Information
Locus ID:
gene:TRIDC5BG067640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 622453197 | 622454513 | - | gene:TRIDC5BG067640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 37,039.21 Da | 67.16 | 78.02 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 121 | 164 | 3.5891E-17 | - |
| Pfam | PF13639 | Ring finger domain | 121 | 164 | 9.5E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 117 | 171 | 3.42E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 91 | 169 | 2.4E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 122 | 163 | 1.2E-4 | IPR001841 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 7.0 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 122 | 164 | 11.781134 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 339 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27420.1 | carbon/nitrogen insensitive 1. Encodes CNI1 (Carbon/Nitrogen Insensitive1) (also named as ATL31), a RING type ubiquitin ligase that functions in the Carbon/Nitrogen response for growth phase transition in Arabidopsis seedlings. | 0 |
| RefSeq | XP_037442018.1 | RING-H2 finger protein ATL38-like [Triticum dicoccoides] | 0 |
| Q8LGA5 | E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6LUV1 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG067640.