HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC5BG066390
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
5B 614142241 614146115 + gene:TRIDC5BG066390
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.88 62,219.02 Da 49.15 94.62 -0.35
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 32 66 8.3E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 31 77 1.7E-8 IPR036047
SUPERFAMILY SSF52047 RNI-like 161 431 3.92E-9 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 149 535 2.0E-13 IPR032675
ProSiteProfiles PS50181 F-box domain profile. 30 66 9.497469 IPR001810
Coils Coil Coil 538 539 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037443785.1 uncharacterized protein LOC119312148 [Triticum dicoccoides] 0
TrEMBL A0A3B6LUM9 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5BG066390.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.