Basic Information
Locus ID:
gene:TRIDC5BG065710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 610080625 | 610081248 | + | gene:TRIDC5BG065710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 21,650.19 Da | 54.89 | 68.36 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 139 | 182 | 1.09621E-21 | - |
| Pfam | PF13639 | Ring finger domain | 140 | 182 | 4.6E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 122 | 188 | 6.25E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 101 | 186 | 2.0E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 140 | 181 | 1.7E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 140 | 182 | 13.182669 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 103 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06490.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037438494.1 | putative RING-H2 finger protein ATL71 [Triticum dicoccoides] | 0 |
| Q9FG21 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6LUF2 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG065710.