Basic Information
Locus ID:
gene:TRIDC5BG065610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the cullin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 609687792 | 609696131 | + | gene:TRIDC5BG065610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 92,121.37 Da | 44.14 | 92.51 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00888 | Cullin family | 143 | 740 | 7.5E-201 | IPR001373 |
| Pfam | PF10557 | Cullin protein neddylation domain | 771 | 830 | 9.1E-23 | IPR019559 |
| SUPERFAMILY | SSF74788 | Cullin repeat-like | 137 | 479 | 5.23E-101 | IPR016159 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 751 | 839 | 7.35E-27 | IPR036390 |
| SUPERFAMILY | SSF75632 | Cullin homology domain | 480 | 750 | 2.49E-100 | IPR036317 |
| Gene3D | G3DSA:1.10.10.10 | - | 766 | 839 | 2.7E-31 | IPR036388 |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 130 | 261 | 1.5E-32 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 379 | 481 | 1.4E-26 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 264 | 378 | 1.5E-35 | - |
| Gene3D | G3DSA:3.30.230.130 | Cullin; Chain C, Domain 2 | 598 | 754 | 1.9E-55 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 482 | 593 | 6.7E-48 | - |
| SMART | SM00182 | cul_2 | 513 | 662 | 5.1E-75 | IPR016158 |
| SMART | SM00884 | Cullin_Nedd8_2 | 768 | 833 | 7.4E-34 | IPR019559 |
| ProSiteProfiles | PS50069 | Cullin family profile. | 483 | 712 | 58.264931 | IPR016158 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 88 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46210.1 | cullin4. Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1. | 0 |
| RefSeq | XP_044399493.1 | cullin-4-like [Triticum aestivum] | 0 |
| Q8LGH4 | Cullin-4 OS=Arabidopsis thaliana OX=3702 GN=CUL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6N0G0 | CULLIN_2 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG065610.