HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC5BG063720
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Protein kinase domain
Maps and Mapping Data
Chromosome Start End Strand ID
5B 595445542 595449057 - gene:TRIDC5BG063720
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.76 60,667.12 Da 67.61 64.86 -0.46
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07714 Protein tyrosine and serine/threonine kinase 228 498 2.5E-43 IPR001245
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 203 499 9.59E-78 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 301 510 2.0E-60 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 199 300 3.1E-33 -
SMART SM00220 serkin_6 225 462 7.3E-31 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 225 505 35.820515 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 231 253 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 345 357 - IPR008271
MobiDBLite mobidb-lite consensus disorder prediction 43 70 - -
MobiDBLite mobidb-lite consensus disorder prediction 27 42 - -
MobiDBLite mobidb-lite consensus disorder prediction 10 26 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 93 - -
MobiDBLite mobidb-lite consensus disorder prediction 537 574 - -
MobiDBLite mobidb-lite consensus disorder prediction 71 93 - -
MobiDBLite mobidb-lite consensus disorder prediction 124 144 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G18470.1 roline-rich extensin-like receptor kinase 4. Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis. 0
RefSeq XP_037443619.1 proline-rich receptor-like protein kinase PERK4 [Triticum dicoccoides] 0
Swiss-Prot Q9ZNQ8 Proline-rich receptor-like protein kinase PERK4 OS=Arabidopsis thaliana OX=3702 GN=PERK4 PE=1 SV=1 0
TrEMBL A0A3B6LTZ9 Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5BG063720.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.