Basic Information
Locus ID:
gene:TRIDC5BG062790
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 589896191 | 589898923 | + | gene:TRIDC5BG062790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 73,657.55 Da | 46.49 | 82.84 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 258 | 530 | 7.4E-78 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 40 | 165 | 4.39E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 38 | 226 | 9.9E-11 | IPR011333 |
| SMART | SM00225 | BTB_4 | 47 | 176 | 9.8E-5 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 256 | 554 | 82.096588 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 47 | 148 | 8.730849 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 683 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| Coils | Coil | Coil | 593 | 627 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66560.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037443560.1 | BTB/POZ domain-containing protein At5g66560-like [Triticum dicoccoides] | 0 |
| Q94A73 | BTB/POZ domain-containing protein At5g66560 OS=Arabidopsis thaliana OX=3702 GN=At5g66560 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453LWD6 | NPH3 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG062790.