Basic Information
Locus ID:
gene:TRIDC5BG061340
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 581701365 | 581706208 | - | gene:TRIDC5BG061340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 109,783.96 Da | 46.12 | 106.07 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 744 | 1012 | 5.26006E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 68 | 1.8E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 741 | 938 | 7.2E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 537 | 595 | 3.0E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 243 | 265 | 0.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 125 | 182 | 7.4E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 716 | 1009 | 2.29E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 90 | 636 | 4.42E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 187 | 2.2E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 407 | 2.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 700 | 813 | 2.3E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 416 | 658 | 1.9E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 814 | 1013 | 6.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 284 | 1.3E-26 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 146 | 169 | 91.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 4.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 581 | 380.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 738 | 990 | 6.4E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 582 | 606 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 264 | 2.3 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 349 | 371 | 7.265315 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 738 | 1012 | 38.336369 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 744 | 766 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 858 | 870 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 582 | 595 | 1.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 172 | 185 | 1.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_037443470.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Triticum dicoccoides] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LTE5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG061340.