halophFGD

Basic Information

Locus ID: gene:TRIDC5BG060810

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
5B	577848732	577852117	+	gene:TRIDC5BG060810

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.63	108,103.50 Da	35.88	107.57	0.17

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14066	STKc_IRAK	721	987	4.60249E-84	-
Pfam	PF13855	Leucine rich repeat	382	441	1.3E-6	IPR001611
Pfam	PF08263	Leucine rich repeat N-terminal domain	46	85	2.4E-9	IPR013210
Pfam	PF00560	Leucine Rich Repeat	552	573	0.21	IPR001611
Pfam	PF13855	Leucine rich repeat	310	366	8.8E-8	IPR001611
Pfam	PF13855	Leucine rich repeat	187	247	5.5E-7	IPR001611
Pfam	PF13855	Leucine rich repeat	115	172	1.8E-6	IPR001611
Pfam	PF00069	Protein kinase domain	716	928	2.0E-42	IPR000719
Pfam	PF13855	Leucine rich repeat	456	513	5.3E-8	IPR001611
SUPERFAMILY	SSF52058	L domain-like	74	394	2.72E-56	-
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	689	987	1.12E-73	IPR011009
SUPERFAMILY	SSF52058	L domain-like	391	640	1.7E-58	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	375	652	1.1E-81	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	791	987	2.8E-51	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	276	374	1.1E-24	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	45	181	8.5E-37	IPR032675
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	677	790	2.8E-25	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	182	275	1.8E-19	IPR032675
SMART	SM00369	LRR_typ_2	453	476	290.0	IPR003591
SMART	SM00369	LRR_typ_2	185	209	29.0	IPR003591
SMART	SM00369	LRR_typ_2	597	622	290.0	IPR003591
SMART	SM00369	LRR_typ_2	136	159	22.0	IPR003591
SMART	SM00369	LRR_typ_2	332	356	79.0	IPR003591
SMART	SM00369	LRR_typ_2	549	572	11.0	IPR003591
SMART	SM00220	serkin_6	715	962	1.2E-30	IPR000719
SMART	SM00369	LRR_typ_2	160	184	97.0	IPR003591
SMART	SM00369	LRR_typ_2	405	429	140.0	IPR003591
SMART	SM00369	LRR_typ_2	477	501	38.0	IPR003591
SMART	SM00369	LRR_typ_2	234	257	16.0	IPR003591
SMART	SM00369	LRR_typ_2	573	596	320.0	IPR003591
ProSiteProfiles	PS50011	Protein kinase domain profile.	715	987	37.445927	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	836	848	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	721	743	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G47580.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_044390456.1	probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Triticum aestivum]
Swiss-Prot	C0LGP4	Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1
TrEMBL	A0A3B6LRZ1	Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5BG060810.