Basic Information
Locus ID:
gene:TRIDC5BG060020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 572887104 | 572895168 | - | gene:TRIDC5BG060020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 118,770.62 Da | 51.54 | 88.00 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 94 | 150 | 2.7E-8 | IPR001611 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 610 | 673 | 2.5E-10 | - |
| Pfam | PF00069 | Protein kinase domain | 761 | 1044 | 7.7E-35 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 10 | 199 | 2.35E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 724 | 1046 | 1.62E-46 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 227 | 5.9E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 720 | 1051 | 4.5E-43 | - |
| SMART | SM00365 | LRR_sd22_2 | 160 | 181 | 14.0 | - |
| SMART | SM00220 | serkin_6 | 726 | 1048 | 1.3E-23 | IPR000719 |
| SMART | SM00364 | LRR_bac_2 | 137 | 156 | 21.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 114 | 132 | 38.0 | - |
| SMART | SM00369 | LRR_typ_2 | 114 | 136 | 2.4 | IPR003591 |
| SMART | SM00364 | LRR_bac_2 | 160 | 179 | 110.0 | - |
| SMART | SM00369 | LRR_typ_2 | 184 | 210 | 370.0 | IPR003591 |
| SMART | SM00364 | LRR_bac_2 | 114 | 133 | 35.0 | - |
| SMART | SM00369 | LRR_typ_2 | 160 | 183 | 2.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 159 | 25.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 116 | 137 | 8.258705 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 726 | 1052 | 30.60507 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 162 | 183 | 8.366514 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 867 | 879 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 160 | 173 | 4.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 117 | 130 | 4.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 442 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 433 | - | - |
| Coils | Coil | Coil | 392 | 412 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04210.1 | Leucine-rich repeat protein kinase family protein. Encodes a putative Raf-related kinase. | 0 |
| RefSeq | XP_037443374.1 | uncharacterized protein LOC119311776 [Triticum dicoccoides] | 0 |
| Q5VT25 | Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens OX=9606 GN=CDC42BPA PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LRR7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG060020.