Basic Information
Locus ID:
gene:TRIDC5BG059920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 572125407 | 572128627 | - | gene:TRIDC5BG059920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 33,780.11 Da | 55.93 | 64.84 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 94 | 309 | 6.7E-74 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 207 | 299 | 1.18E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 205 | 312 | 4.8E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 210 | 300 | 25.346584 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 154 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23050.1 | indole-3-acetic acid 7. Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. | 0 |
| RefSeq | XP_037443368.1 | auxin-responsive protein IAA13-like [Triticum dicoccoides] | 0 |
| A2XLV9 | Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453LSB2 | Auxin-responsive protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG059920.