Basic Information
Locus ID:
gene:TRIDC5BG059460
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 567981649 | 567984492 | + | gene:TRIDC5BG059460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 69,044.07 Da | 58.55 | 77.01 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 226 | 493 | 1.6E-84 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 9 | 163 | 1.18E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 16 | 201 | 2.7E-10 | IPR011333 |
| SMART | SM00225 | BTB_4 | 25 | 170 | 5.7E-4 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 225 | 517 | 88.977142 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 105 | - | - |
| Coils | Coil | Coil | 77 | 104 | - | - |
| Coils | Coil | Coil | 557 | 577 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66560.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037443344.1 | BTB/POZ domain-containing protein At5g66560-like [Triticum dicoccoides] | 0 |
| Q94A73 | BTB/POZ domain-containing protein At5g66560 OS=Arabidopsis thaliana OX=3702 GN=At5g66560 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LT61 | NPH3 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG059460.