Basic Information
Locus ID:
gene:TRIDC5BG059380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 566198110 | 566203414 | + | gene:TRIDC5BG059380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 48,844.40 Da | 69.00 | 61.13 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16525 | RING-HC_PCGF | 107 | 149 | 2.31671E-16 | - |
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 108 | 148 | 1.1E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 103 | 159 | 3.06E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 202 | 4.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 108 | 148 | 1.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 108 | 149 | 11.840146 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 124 | 133 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 81 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30580.3 | - | 0 |
| RefSeq | XP_037443335.1 | E3 ubiquitin protein ligase DRIP2-like [Triticum dicoccoides] | 0 |
| Q94AY3 | E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LSV7 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG059380.