Basic Information
Locus ID:
gene:TRIDC5BG059350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 565819700 | 565821614 | + | gene:TRIDC5BG059350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 23,832.66 Da | 57.58 | 71.56 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 8 | 171 | 6.5E-36 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 129 | 208 | 1.28E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 127 | 221 | 2.4E-39 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 132 | 209 | 25.210154 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 95 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_037443328.1 | auxin-responsive protein IAA30-like [Triticum dicoccoides] | 0 |
| Q75GK0 | Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LT46 | Auxin-responsive protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG059350.