Basic Information
Locus ID:
gene:TRIDC5BG057350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 551501989 | 551504402 | + | gene:TRIDC5BG057350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 82,042.23 Da | 33.17 | 87.25 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 319 | 348 | 2.13625E-7 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 319 | 351 | 2.0E-6 | IPR001881 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 447 | 710 | 8.4E-41 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 32 | 93 | 9.8E-11 | IPR025287 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 275 | 357 | 7.85E-11 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 428 | 714 | 3.78E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 520 | 730 | 8.9E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 400 | 519 | 2.0E-28 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 277 | 355 | 3.3E-14 | - |
| SMART | SM00179 | egfca_6 | 319 | 361 | 2.5E-6 | IPR001881 |
| SMART | SM00220 | serkin_6 | 444 | 715 | 4.6E-28 | IPR000719 |
| SMART | SM00181 | egf_5 | 269 | 318 | 27.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 322 | 361 | 0.13 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 444 | 722 | 34.689796 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 565 | 577 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 319 | 344 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 450 | 473 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_037443167.1 | wall-associated receptor kinase 3-like [Triticum dicoccoides] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LSM5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG057350.