Basic Information
Locus ID:
gene:TRIDC5BG057060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 548855888 | 548857906 | - | gene:TRIDC5BG057060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 40,280.76 Da | 38.00 | 85.67 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 43 | 162 | 8.76301E-24 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 189 | 299 | 1.3055E-47 | - |
| Pfam | PF00917 | MATH domain | 59 | 156 | 7.7E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 192 | 301 | 1.2E-28 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 40 | 172 | 1.42E-28 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 178 | 300 | 1.84E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 39 | 169 | 6.5E-26 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 302 | 363 | 1.1E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 175 | 296 | 5.3E-38 | IPR011333 |
| SMART | SM00061 | math_3 | 45 | 147 | 2.3E-9 | IPR002083 |
| SMART | SM00225 | BTB_4 | 200 | 302 | 9.8E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 200 | 267 | 17.003649 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 40 | 164 | 19.930691 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_037438347.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LSA1 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG057060.