Basic Information
Locus ID:
gene:TRIDC5BG056220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 543915985 | 543918222 | - | gene:TRIDC5BG056220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 62,326.45 Da | 56.70 | 80.07 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 133 | 168 | 3.2E-11 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 375 | 405 | 2.8E-4 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 230 | 282 | 2.2E-8 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 187 | 512 | 2.35E-26 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 132 | 183 | 9.03E-15 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 133 | 165 | 3.6E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 326 | 566 | 1.2E-11 | IPR015915 |
| Gene3D | G3DSA:2.130.10.80 | - | 166 | 325 | 2.0E-7 | IPR037293 |
| SMART | SM00256 | fbox_2 | 137 | 177 | 1.8E-8 | IPR001810 |
| SMART | SM00612 | kelc_smart | 241 | 295 | 0.12 | IPR006652 |
| SMART | SM00612 | kelc_smart | 374 | 421 | 0.24 | IPR006652 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 131 | 177 | 11.828977 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 372 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42350.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_037443075.1 | F-box/kelch-repeat protein At5g42350-like [Triticum dicoccoides] | 0 |
| Q9FII2 | F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana OX=3702 GN=At5g42350 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LS39 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG056220.