Basic Information
Locus ID:
gene:TRIDC5BG056070
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 543093040 | 543093850 | + | gene:TRIDC5BG056070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 20,897.96 Da | 57.03 | 88.51 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 113 | 156 | 2.35234E-15 | - |
| Pfam | PF13639 | Ring finger domain | 113 | 156 | 4.9E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 104 | 162 | 2.65E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 75 | 161 | 8.8E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 114 | 155 | 1.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 114 | 156 | 12.1057 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20823.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037438337.1 | RING-H2 finger protein ATL8-like [Triticum dicoccoides] | 0 |
| Q9LM69 | RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I7BF63 | RING-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG056070.